From: "Saved by Windows Internet Explorer 7" Subject: Concise Summary Report (../data/20080627/Ftgernsem.dat) Date: Fri, 27 Jun 2008 17:16:19 -0400 MIME-Version: 1.0 Content-Type: multipart/related; type="text/html"; boundary="----=_NextPart_000_0046_01C8D879.839D84C0" X-MimeOLE: Produced By Microsoft MimeOLE V6.0.6000.16545 This is a multi-part message in MIME format. ------=_NextPart_000_0046_01C8D879.839D84C0 Content-Type: text/html; charset="utf-8" Content-Transfer-Encoding: quoted-printable Content-Location: http://www.matrixscience.com/cgi/master_results.pl?file=../data/20080627/Ftgernsem.dat =EF=BB=BF Concise Summary Report = (../data/20080627/Ftgernsem.dat)

Mascot Search=20 Results

User    =
        : daishaojun
Email           : sdai@ufl.edu
Search title    : 
Database        : NCBInr 20080616 (6589360 sequences; 2253133281 =
residues)
Taxonomy        : Viridiplantae (Green Plants) (483498 sequences)
Timestamp       : 27 Jun 2008 at 21:15:30 GMT
Top Score       : 94 for gi|115438000, =
Os01g0588200 [Oryza sativa (japonica cultivar-group)]

Probability Based Mowse Score

Protein score is -10*Log(P), where = P is=20 the probability that the observed match is a random event.
Protein = scores=20 greater than 69 are significant (p<0.05).

3D"Score =20

= =20 =20 = =20 =20 = =20 =20 =20 =20 =20 = = =20

=20

1. gi|115438000 Mass: = ;29930 Score: 94 Expect:<= /B> 0.00017 Queries=20 matched: 7

Os01g0588200 [Oryza sativa (japonica=20 cultivar-group)]

gi|30408003 Mass: = 19537 Score: 37 = ; Expect: 96 Queries=20 matched: 3

RCa10.4 NBS type resistance protein [Manihot=20 esculenta]

`2.`	`gi\|115488722 Mass: = ;17900 Score: 61 &nbs= p; Expect: 0.35 Queries=20 matched: 5`
	`Os12g0507700 [Oryza sativa (japonica=20 cultivar-group)]`

Search Parameters

Type of search         : Peptide Mass =
Fingerprint
Enzyme                 : Trypsin
Fixed modifications    : Carbamidomethyl (C)
Variable modifications : Oxidation (M)
Mass values            : Monoisotopic
Protein Mass           : Unrestricted
Peptide Mass Tolerance : =C2=B1 0.3 Da
Peptide Charge State   : 1+
Max Missed Cleavages   : 1
Number of queries      : 14

Mascot: http://www.matrixscience.com/ =

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document.getElementById !=3D "undefined"){=0A= browser_EXCLUDE =3D 0;=0A= if(agt.indexOf("netscape/6") !=3D -1 || agt.indexOf("netscape6") !=3D = -1){browser_NS6 =3D 1;}=0A= else if(agt.indexOf("netscape/7") !=3D -1 || agt.indexOf("netscape7") = !=3D -1){browser_NS6 =3D 1; browser_NS7 =3D 1;}=0A= else if(agt.indexOf("gecko") !=3D -1){browser_NS6 =3D 1; browser_MZ7 = =3D 1;}=0A= if(agt.indexOf("safari") !=3D -1 || (typeof document.childNodes !=3D = "undefined" && typeof document.all =3D=3D "undefined" && typeof = navigator.taintEnabled =3D=3D "undefined")){browser_MZ7 =3D 0; = browser_NS6 =3D 1; browser_SAF =3D 1;}=0A= }=0A= =0A= else if((agt.indexOf('mozilla') !=3D -1) && = (parseInt(navigator.appVersion) >=3D 3)){=0A= browser_EXCLUDE =3D 0;=0A= if (parseInt(navigator.appVersion) >=3D 4) {=0A= browser_NS4 =3D 1;=0A= } else {=0A= browser_NS3 =3D 1;=0A= }=0A= if(typeof navigator.mimeTypes['*'] =3D=3D "undefined"){=0A= browser_EXCLUDE =3D 1;=0A= browser_NS4 =3D 0;=0A= browser_NS3 =3D 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`1.`	`gi\|115438000 Mass: = ;29930 Score: 94 Expect:<= /B> 0.00017 Queries=20 matched: 7`
	`Os01g0588200 [Oryza sativa (japonica=20 cultivar-group)]`

	`gi\|30408003 Mass: = 19537 Score: 37 = ; Expect: 96 Queries=20 matched: 3`
	`RCa10.4 NBS type resistance protein [Manihot=20 esculenta]`

		Help
	Significance threshold p<	Max. number of hits

Mascot Search=20 Results

Probability Based Mowse Score

Concise Protein Summary Report

Search Parameters