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User : P2F3
Email : [email-masked]
Search title :
Database : NCBInr 20031101 (1547988 sequences; 504940068 residues)
Taxonomy : Oryza sativa (rice) (29567 sequences)
Timestamp : 6 Nov 2003 at 10:02:45 GMT
Top Score : 63 for gi|8671504, beta 2 subunit of 20S proteasome [Oryza sativa (japonica cultivar-group)]

Probability Based Mowse Score
Score is -10*Log(P), where P is the
probability that the observed match is a random event.
Protein scores greater
than 57 are significant (p<0.05).

Concise Protein Summary Report
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to full Protein Summary Report

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Summary Report (../data/20031106/FTtombYT.dat)

1. gi|8671504 Mass: 28979 Total score: 63 Peptides matched: 6
beta 2 subunit of 20S proteasome [Oryza sativa (japonica cultivar-group)]
gi|15528747 Mass: 72173 Total score: 30 Peptides matched: 5
putative RNA helicase [Oryza sativa (japonica cultivar-group)]
gi|28261489 Mass: 22645 Total score: 27 Peptides matched: 3
putative mucin [Oryza sativa (japonica cultivar-group)]

2. gi|23307584 Mass: 55225 Total score: 45 Peptides matched: 6
putative NADH dehydrogenase [Oryza sativa (japonica cultivar-group)]
gi|14488291 Mass: 29727 Total score: 30 Peptides matched: 4
Hypothetical protein [Oryza sativa]
gi|20521397 Mass: 10333 Total score: 28 Peptides matched: 3
B1151A10.21 [Oryza sativa (japonica cultivar-group)]
gi|18565436 Mass: 12500 Total score: 27 Peptides matched: 3
P0034C09.37 [Oryza sativa (japonica cultivar-group)]

3. gi|9828445 Mass: 109121 Total score: 44 Peptides matched: 7
phosphoenolpyruvate carboxylase [Oryza sativa]
gi|13486908 Mass: 18006 Total score: 33 Peptides matched: 3
P0024G09.29 [Oryza sativa (japonica cultivar-group)]
gi|29027854 Mass: 45643 Total score: 32 Peptides matched: 4
lipase (class 3)-like protein [Oryza sativa (japonica cultivar-group)]
gi|22296369 Mass: 25221 Total score: 28 Peptides matched: 3
circumsporozoite protein-like protein [Oryza sativa (japonica cultivar-group)]

4. gi|21742155 Mass: 120801 Total score: 39 Peptides matched: 8
OSJNBa0081G05.1 [Oryza sativa (japonica cultivar-group)]
gi|32482943 Mass: 37646 Total score: 37 Peptides matched: 5
OSJNBb0072M01.8 [Oryza sativa (japonica cultivar-group)]
gi|21742640 Mass: 90342 Total score: 35 Peptides matched: 6
OSJNBa0004L19.12 [Oryza sativa (japonica cultivar-group)]
gi|25553625 Mass: 11345 Total score: 34 Peptides matched: 3
hypothetical protein [Oryza sativa (japonica cultivar-group)]
gi|22831098 Mass: 31240 Total score: 31 Peptides matched: 4
gi|31432180 Mass: 41275 Total score: 30 Peptides matched: 4
putative speckle-type protein [Oryza sativa (japonica cultivar-group)]
gi|20279453 Mass: 79748 Total score: 30 Peptides matched: 5
putative polyprotein [Oryza sativa (japonica cultivar-group)]
gi|13940603 Mass: 51079 Total score: 29 Peptides matched: 4
Putative cystathionine gamma synthase (O-succinylhomoserine (thiol)-lyase) [Oryza sativa]

5. gi|32492212 Mass: 6089 Total score: 38 Peptides matched: 3
OSJNBa0042N22.5 [Oryza sativa (japonica cultivar-group)]

Search Parameters

Type of search : Peptide Mass Fingerprint
Enzyme : Trypsin
Variable modifications : Acetyl (N-term),Carbamidomethyl (C)
Mass values : Monoisotopic
Protein Mass : Unrestricted
Peptide Mass Tolerance : ± 0.2 Da
Peptide Charge State : 1+
Max Missed Cleavages : 1
Number of queries : 13

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