From: "Saved by Windows Internet Explorer 7" Subject: Mascot Search Results Date: Fri, 27 Jun 2008 17:13:45 -0400 MIME-Version: 1.0 Content-Type: multipart/related; type="text/html"; boundary="----=_NextPart_000_003F_01C8D879.2822C970" X-MimeOLE: Produced By Microsoft MimeOLE V6.0.6000.16545 This is a multi-part message in MIME format. ------=_NextPart_000_003F_01C8D879.2822C970 Content-Type: text/html; charset="iso-8859-1" Content-Transfer-Encoding: quoted-printable Content-Location: file://C:\Users\Shaojun Dai\Desktop\PPP\P2-??\result-A2\P2F3.htm Mascot Search = Results

= Mascot Search=20 Results

User    =
        : P2F3
Email           : lilei3000@hotmail.com
Search title    : 
Database        : NCBInr 20031101 (1547988 sequences; 504940068 =
residues)
Taxonomy        : Oryza sativa (rice) (29567 sequences)
Timestamp       : 6 Nov 2003 at 10:02:45 GMT
Top Score       : 63 for gi|8671504, =
beta 2 subunit of 20S proteasome [Oryza sativa (japonica =
cultivar-group)]

Probability Based Mowse Score

Score is -10*Log(P), where P is = the=20 probability that the observed match is a random event.
Protein scores = greater=20 than 57 are significant (p<0.05).=20

3D"Score=20

Concise Protein Summary Report

Switch=20 to full Protein Summary Report=20

To create a bookmark for this report, right click this link: Concise=20 Summary Report (../data/20031106/FTtombYT.dat)=20

=20 = =20 =20 = = =   =20 
1.   gi|8671504           Mass: =
28979   Total score: 63  =
Peptides matched: 6 =20
     beta 2 subunit of 20S proteasome [Oryza sativa (japonica =
cultivar-group)]
     gi|15528747          Mass: =
72173   Total score: 30  Peptides matched: 5 =20
     putative RNA helicase [Oryza sativa (japonica cultivar-group)]
     gi|28261489          Mass: =
22645   Total score: 27  Peptides matched: 3 =20
     putative mucin [Oryza sativa (japonica cultivar-group)]



2.   gi|23307584          Mass: =
55225   Total score: 45  Peptides matched: 6 =20
     putative NADH dehydrogenase [Oryza sativa (japonica =
cultivar-group)]
     gi|14488291          Mass: =
29727   Total score: 30  Peptides matched: 4 =20
     Hypothetical protein [Oryza sativa]
     gi|20521397          Mass: =
10333   Total score: 28  Peptides matched: 3 =20
     B1151A10.21 [Oryza sativa (japonica cultivar-group)]
     gi|18565436          Mass: =
12500   Total score: 27  Peptides matched: 3 =20
     P0034C09.37 [Oryza sativa (japonica cultivar-group)]



3.   gi|9828445           Mass: =
109121   Total score: 44  Peptides matched: 7 =20
     phosphoenolpyruvate carboxylase [Oryza sativa]
     gi|13486908          Mass: =
18006   Total score: 33  Peptides matched: 3 =20
     P0024G09.29 [Oryza sativa (japonica cultivar-group)]
     gi|29027854          Mass: =
45643   Total score: 32  Peptides matched: 4 =20
     lipase (class 3)-like protein [Oryza sativa (japonica =
cultivar-group)]
     gi|22296369          Mass: =
25221   Total score: 28  Peptides matched: 3 =20
     circumsporozoite protein-like protein [Oryza sativa (japonica =
cultivar-group)]



4.   gi|21742155          Mass: =
120801   Total score: 39  Peptides matched: 8 =20
     OSJNBa0081G05.1 [Oryza sativa (japonica cultivar-group)]
     gi|32482943          Mass: =
37646   Total score: 37  Peptides matched: 5 =20
     OSJNBb0072M01.8 [Oryza sativa (japonica cultivar-group)]
     gi|21742640          Mass: =
90342   Total score: 35  Peptides matched: 6 =20
     OSJNBa0004L19.12 [Oryza sativa (japonica cultivar-group)]
     gi|25553625          Mass: =
11345   Total score: 34  Peptides matched: 3 =20
     hypothetical protein [Oryza sativa (japonica cultivar-group)]
     gi|22831098          Mass: =
31240   Total score: 31  Peptides matched: 4 =20
     hypothetical protein [Oryza sativa (japonica cultivar-group)]
     gi|31432180          Mass: =
41275   Total score: 30  Peptides matched: 4 =20
     putative speckle-type protein [Oryza sativa (japonica =
cultivar-group)]
     gi|20279453          Mass: =
79748   Total score: 30  Peptides matched: 5 =20
     putative polyprotein [Oryza sativa (japonica cultivar-group)]
     gi|13940603          Mass: =
51079   Total score: 29  Peptides matched: 4 =20
     Putative cystathionine gamma synthase (O-succinylhomoserine =
(thiol)-lyase) [Oryza sativa]



5.   gi|32492212          Mass: =
6089   Total score: 38  Peptides matched: 3 =20
     OSJNBa0042N22.5 [Oryza sativa (japonica cultivar-group)]

Search Parameters

Type of search         : Peptide Mass =
Fingerprint
Enzyme                 : Trypsin
Variable modifications : Acetyl (N-term),Carbamidomethyl (C)
Mass values            : Monoisotopic
Protein Mass           : Unrestricted
Peptide Mass Tolerance : =B1 0.2 Da
Peptide Charge State   : 1+
Max Missed Cleavages   : 1
Number of queries      : 13

Mascot:  http://www.matrixscience= .com/index.html=20

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