Mascot Search
Results

User : daishaojun
Email : [email-masked]
Search title :
Database : NCBInr 20080616 (6589360 sequences; 2253133281 residues)
Taxonomy : Viridiplantae (Green Plants) (483498 sequences)
Timestamp : 27 Jun 2008 at 19:17:01 GMT
Top Score : 109 for gi|115454971, Os03g0718100 [Oryza sativa (japonica cultivar-group)]

Probability Based Mowse Score
Protein score is -10*Log(P), where P is
the probability that the observed match is a random event.
Protein scores
greater than 69 are significant (p<0.05).

Concise Protein Summary Report

Protein Summary Concise Protein Summary Export
Search Results

Help

Significance threshold p<

Max. number of hits

1.

gi|115454971    Mass: 42014    Score: 109    Expect: 6.1e-06  Queries
matched: 14

Os03g0718100 [Oryza sativa (japonica
cultivar-group)]

gi|1703107    Mass: 42121    Score: 106    Expect: 1.2e-05  Queries
matched: 13

Actin-1

gi|3219758    Mass: 37286    Score: 99     Expect: 5.6e-05  Queries
matched: 12

Actin-66

gi|15076949    Mass: 41835    Score: 94     Expect: 0.00022  Queries
matched: 12

actin [Musa ABB Group]

gi|151413783    Mass: 41780    Score: 93     Expect: 0.00025  Queries
matched: 12

actin [Musa acuminata]

gi|231496    Mass: 41987    Score: 92     Expect: 0.00031  Queries
matched: 12

Actin-58

gi|55820068    Mass: 41948    Score: 92     Expect: 0.00033  Queries
matched: 12

stem cambial region actin protein [Eucommia
ulmoides]

gi|147866522    Mass: 42016    Score: 92     Expect: 0.00033  Queries
matched: 12

hypothetical protein [Vitis
vinifera]

gi|20322    Mass: 42211    Score: 91     Expect: 0.0004  Queries
matched: 13

unnamed protein product [Oryza sativa (indica
cultivar-group)]

gi|295885    Mass: 42168    Score: 91     Expect: 0.0004  Queries
matched: 13

actin [Oryza sativa (indica
cultivar-group)]

gi|3219759    Mass: 37282    Score: 85     Expect: 0.0015  Queries
matched: 11

Actin-79

gi|1498330    Mass: 37264    Score: 85     Expect: 0.0016  Queries
matched: 11

actin [Glycine max]

gi|125592529    Mass: 43133    Score: 80     Expect: 0.0046  Queries
matched: 11

hypothetical protein OsJ_016071 [Oryza sativa (japonica
cultivar-group)]

gi|231503    Mass: 41844    Score: 79     Expect: 0.0059  Queries
matched: 11

Actin-97

gi|24496452    Mass: 41929    Score: 79     Expect: 0.0059  Queries
matched: 11

actin [Hordeum vulgare]

gi|115461639    Mass: 41897    Score: 79     Expect: 0.0059  Queries
matched: 11

Os05g0106600 [Oryza sativa (japonica
cultivar-group)]

gi|115489824    Mass: 41799    Score: 79     Expect: 0.0064  Queries
matched: 10

Os12g0641000 [Oryza sativa (japonica
cultivar-group)]

gi|125537570    Mass: 43190    Score: 79     Expect: 0.0064  Queries
matched: 10

hypothetical protein OsI_038017 [Oryza sativa (indica
cultivar-group)]

gi|1531672    Mass: 41945    Score: 79     Expect: 0.0065  Queries
matched: 11

actin [Striga asiatica]

gi|81076210    Mass: 41969    Score: 78     Expect: 0.0086  Queries
matched: 11

actin-like [Solanum tuberosum]

gi|7960245    Mass: 41911    Score: 77     Expect: 0.009  Queries
matched: 11

actin-like protein [Phalaenopsis sp. 'True
Lady']

gi|23092520    Mass: 41925    Score: 77     Expect: 0.009  Queries
matched: 11

actin [Phalaenopsis hybrid
cultivar]

gi|54035683    Mass: 41867    Score: 77     Expect: 0.01  Queries
matched: 10

Actin

gi|461465    Mass: 41940    Score: 75     Expect: 0.016  Queries
matched: 10

Actin

gi|3219771    Mass: 37234    Score: 72     Expect: 0.028  Queries
matched: 10

Actin-41

gi|1498390    Mass: 37273    Score: 71     Expect: 0.038  Queries
matched: 9

actin [Zea mays]

gi|83423376    Mass: 32420    Score: 70     Expect: 0.052  Queries
matched: 8

actin [Capsicum chinense]

gi|138977902    Mass: 30551    Score: 70     Expect: 0.052  Queries
matched: 8

actin [Cocos nucifera]

gi|231504    Mass: 39756    Score: 69     Expect: 0.056  Queries
matched: 10

Actin-100

gi|3219769    Mass: 37002    Score: 68     Expect: 0.078  Queries
matched: 10

Actin-42

gi|1498388    Mass: 37244    Score: 68     Expect: 0.086  Queries
matched: 10

actin [Zea mays]

gi|56181502    Mass: 40339    Score: 68     Expect: 0.086  Queries
matched: 10

putative actin 2 [Chorispora
bungeana]

gi|112280267    Mass: 32425    Score: 67     Expect: 0.088  Queries
matched: 8

actin [Aegiceras corniculatum]

gi|50058115    Mass: 41885    Score: 67     Expect: 0.099  Queries
matched: 10

actin [Nicotiana tabacum]

gi|231502    Mass: 21681    Score: 67     Expect: 0.099  Queries
matched: 7

Actin-85C

gi|2253219    Mass: 37114    Score: 66     Expect: 0.11  Queries
matched: 8

actin 2 [Podocarpus macrophyllus]

gi|15229955    Mass: 41876    Score: 66     Expect: 0.12  Queries
matched: 10

ACT11 (ACTIN-11); structural constituent of cytoskeleton
[Arabidopsis thaliana]

gi|187937280    Mass: 42096    Score: 66     Expect: 0.12  Queries
matched: 10

actin [Cicer arietinum]

gi|231505    Mass: 41902    Score: 66     Expect: 0.14  Queries
matched: 10

Actin-101

gi|3219760    Mass: 37274    Score: 65     Expect: 0.14  Queries
matched: 9

Actin-93

gi|37650549    Mass: 28580    Score: 63     Expect: 0.23  Queries
matched: 8

putative actin [Lolium
multiflorum]

gi|115484337    Mass: 41824    Score: 62     Expect: 0.34  Queries
matched: 8

Os11g0163100 [Oryza sativa (japonica
cultivar-group)]

gi|7960247    Mass: 41852    Score: 62     Expect: 0.34  Queries
matched: 8

actin-like protein [Phalaenopsis sp. 'True
Lady']

gi|6103623    Mass: 41792    Score: 62     Expect: 0.34  Queries
matched: 8

actin [Picea rubens]

gi|9965319    Mass: 41884    Score: 62     Expect: 0.34  Queries
matched: 8

actin [Setaria italica]

gi|157355850    Mass: 41794    Score: 61     Expect: 0.4  Queries
matched: 8

unnamed protein product [Vitis
vinifera]

gi|125533526    Mass: 43440    Score: 60     Expect: 0.44  Queries
matched: 8

hypothetical protein OsI_034033 [Oryza sativa (indica
cultivar-group)]

gi|147776496    Mass: 41918    Score: 60     Expect: 0.47  Queries
matched: 8

hypothetical protein [Vitis
vinifera]

gi|118481119    Mass: 41918    Score: 60     Expect: 0.47  Queries
matched: 8

unknown [Populus trichocarpa]

2.

gi|1498344    Mass: 37155    Score: 68     Expect: 0.082  Queries
matched: 9

actin [Glycine max]

Search Parameters

Type of search : Peptide Mass Fingerprint
Enzyme : Trypsin
Fixed modifications : Carbamidomethyl (C)
Variable modifications : Oxidation (M)
Mass values : Monoisotopic
Protein Mass : Unrestricted
Peptide Mass Tolerance : ± 0.3 Da
Peptide Charge State : 1+
Max Missed Cleavages : 1
Number of queries : 26

Mascot:  http://www.matrixscience.com/