From: "Saved by Windows Internet Explorer 7" Subject: Concise Summary Report (../data/20080627/FtgernsOt.dat) Date: Fri, 27 Jun 2008 17:25:21 -0400 MIME-Version: 1.0 Content-Type: multipart/related; type="text/html"; boundary="----=_NextPart_000_005C_01C8D87A.C6EE12C0" X-MimeOLE: Produced By Microsoft MimeOLE V6.0.6000.16545 This is a multi-part message in MIME format. ------=_NextPart_000_005C_01C8D87A.C6EE12C0 Content-Type: text/html; charset="utf-8" Content-Transfer-Encoding: quoted-printable Content-Location: http://www.matrixscience.com/cgi/master_results.pl?file=../data/20080627/FtgernsOt.dat =EF=BB=BF Concise Summary Report = (../data/20080627/FtgernsOt.dat)

Mascot Search=20 Results

User    =
        : daishaojun
Email           : sdai@ufl.edu
Search title    : 
Database        : NCBInr 20080616 (6589360 sequences; 2253133281 =
residues)
Timestamp       : 27 Jun 2008 at 21:24:59 GMT
Top Score       : 104 for gi|303859, =
brain specific protein [Oryza sativa]

Probability Based Mowse Score

Protein score is -10*Log(P), where = P is=20 the probability that the observed match is a random event.
Protein = scores=20 greater than 81 are significant (p<0.05).

3D"Score=20

=20

Concise Protein Summary Report

Help
  Significance threshold p< Max. number of hits
= =20 =20 = =20 =20 = =20 =20 = =20 =20 =20 =20 =20 = = = =20

  =20

1.     gi|303859    Mass: 29= 226    Score: 104    Expect:&n= bsp;0.00026  Queries=20 matched: 8
  brain specific protein [Oryza=20 sativa]

2.     gi|115454901    Mass: = ;29274    Score: 102    Expect:&n= bsp;0.00042  Queries=20 matched: 8
  Os03g0710800 [Oryza sativa (japonica=20 cultivar-group)]
       gi|22607    Mass: 293= 61    Score: 70    &n= bsp;Expect: 0.59  Queries=20 matched: 6
  14-3-3 protein homologue [Hordeum vulgare subsp.=20 vulgare]
       gi|40781605    Mass: = 29388    Score: 70    = ; Expect: 0.59  Queries=20 matched: 6
  14-3-3 protein [Triticum = aestivum]
       gi|112684    Mass: 29= 448    Score: 70    &= nbsp;Expect: 0.59  Queries=20 matched: 6
  14-3-3-like protein A = (14-3-3A)
       gi|166359604    Mass: = ;29344    Score: 56   &nbs= p; Expect: 19  Queries=20 matched: 5
  14-3-3 protein GF14 omega [Thellungiella=20 halophila]
       gi|5902676    Mass: 2= 9043    Score: 55    =  Expect: 21  Queries=20 matched: 5
  14-3-3-like protein
       gi|2492488    Mass: 2= 9491    Score: 54    =  Expect: 24  Queries=20 matched: 5
  14-3-3-like protein
       gi|20340229    Mass: = 30650    Score: 52    = ; Expect: 40  Queries=20 matched: 5
  14-3-3-like protein [Thellungiella=20 halophila]
       gi|8515888    Mass: 2= 9754    Score: 52    =  Expect: 43  Queries=20 matched: 5
  14-3-3 protein [Populus x=20 canescens]
       gi|1168196    Mass: 2= 9427    Score: 52    =  Expect: 43  Queries=20 matched: 5
  14-3-3-like protein
       gi|4850247    Mass: 2= 9455    Score: 52    =  Expect: 43  Queries=20 matched: 5
  14-3-3-like protein [Pisum=20 sativum]
       gi|41056815    Mass: = 28862    Score: 51    = ; Expect: 55  Queries=20 matched: 5
  14-3-3 protein isoform 20R [Solanum=20 tuberosum]
       gi|77416973    Mass: = 28877    Score: 51    = ; Expect: 55  Queries=20 matched: 5
  14-3-3 protein-like [Solanum=20 tuberosum]
       gi|83284005    Mass: = 28878    Score: 51    = ; Expect: 55  Queries=20 matched: 5
  14-3-3 protein-like protein [Solanum=20 tuberosum]
       gi|45861989    Mass: = 28892    Score: 51    = ; Expect: 55  Queries=20 matched: 5
  14-3-3 protein [Solanum = chacoense]
3.     gi|1168189    Mass: 2= 9516    Score: 69    =  Expect: 0.77  Queries=20 matched: 6
  14-3-3-like protein A = (VFA-1433A)
       gi|4775555    Mass: 2= 9530    Score: 69    =  Expect: 0.77  Queries=20 matched: 6
  14-3-3-like protein [Pisum=20 sativum]
       gi|148612111    Mass: = ;29430    Score: 54   &nbs= p; Expect: 23  Queries=20 matched: 5
  14-3-3-like protein [Cicer=20 arietinum]

Search Parameters

Type of search         : Peptide Mass =
Fingerprint
Enzyme                 : Trypsin
Fixed modifications    : Carbamidomethyl (C)
Variable modifications : Oxidation (M)
Mass values            : Monoisotopic
Protein Mass           : Unrestricted
Peptide Mass Tolerance : =C2=B1 0.3 Da
Peptide Charge State   : 1+
Max Missed Cleavages   : 1
Number of queries      : 16

Mascot:  http://www.matrixscience.com/ =

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